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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886093.1_cds_XP_016440213.1_35691
CDS Infomation

[gene=LOC107766017] [db_xref=GeneID:107766017] [protein=protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like] [protein_id=XP_016440213.1] [location=complement(join(12234..12585,13037..13266))] [gbkey=CDS]
Sequence

ATGGATTTTGTCACAGCACAAGGAAATCTTACTTCAGGTAATAATATGGTTCAAGGTACA
AACTTTCTTCCTAACAGTACTACCGTCATTCCGTCATCAGCTCCTCCATTGAGCCGGTAT
GAGAACCAGAAACGTCGAGATTGGAACACTTTTTGCCAGTACTTGAGAAATCACCATCCT
CCACTTTCACTTCCTCACTGCAGTGGTGCACATGTCCTAGAGTTCCTCAGGTATTTAGAC
CAGTTCGGCAAGACGAAAGTCCACAACCAAAATTGTCCATTTTTTGGGCTACAAAATCCT
CCAGCACCTTGTCCTTGTCCTTTAAGGCAAGCTTGGGGAAGTCTAGATGCATTAATTGGT
CGACTTCGAGCTGCATATGAAGAAAATGGTGGAAAGCCAGAAATGAACCCATTTGGGGCT
CGAGCTGTGAGGCTATTTTTACGAGAAGTTAGAGATTTTCAGTCAAAATCTAGAGGGATT
AGCTATGAGAAGAAAAGGAAGAGATCATCTACAACAAATAAGCAGAAAATAGCAGTGGCT
GCTGCAGGTGCAACTTTATGTGGACAGACAAATATTAATTAG

Peptide Sequence

PEP ID

XP_016440213.1
PEP Infomation

PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Nicotiana tabacum]
Sequence

MDFVTAQGNLTSGNNMVQGTNFLPNSTTVIPSSAPPLSRYENQKRRDWNTFCQYLRNHHP
PLSLPHCSGAHVLEFLRYLDQFGKTKVHNQNCPFFGLQNPPAPCPCPLRQAWGSLDALIG
RLRAAYEENGGKPEMNPFGARAVRLFLREVRDFQSKSRGISYEKKRKRSSTTNKQKIAVA
AAGATLCGQTNIN

Transcript Sequence

Gene sequence data has not been registered.